2015 C. gigas oysterseed DIA update
Today I worked on the DIA protocol and now have an exported report that I think I can start using with MS Stats. Still waiting on some input from Emma, but details are below:
I split the protocol into two parts, so far:
They are still works in progress, and I’ll add more details to them later.
What I have to show:
OWL folder devoted to this new protocol and the outputs:
new .zip SkylineDaily file: 20181210-2015Cgseed-DIA.sky.zip
SkylineDaily report file: 20181210-SkylinetoMSStats-report.csv
EncylopeDIA suite output data file: 20181210-Cg-quant-reps.elib.peptides.txt
However, I still need to hear back from Emma, so I’ll hold off on the MSStats until she has time to take a look at the report .csv.