Updates on results and methods for the paper.

Results

Trying to get a list of differentially expressed genes that are shared across the two summers that contribute to the top 9 significantly enriched biological processes (Benjamini-Hochberg <0.05).

GitHub Issue: 1996

Used the solution from chatqpt for R that Steven found.

R code: paper-pycno-sswd-2021-2022/code/25-compare-2021-2022.Rmd

Final table: paper-pycno-sswd-2021-2022/analyses/25-compare-2021-2022/DEGlist_enrichedprocesses_2021-2022.tab

Methods

Almost done –> have to put in references and tidy things up!

Goals

See post for update meeting with SR tomorrow: Meeting Agenda and Action Items - Prep for Halloween Meeting with Steven