Crab
Work on paper
Pick samples accounting for temperature and infection status from master-qubit-sample.csv
Assemble transcriptomes, annotate etc. once new data arrives (should be any day now!)
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Oysterseed DIA - trying to characterize list of detected proteins in relation to _C. gigas_ proteome
I’m still working on wrapping up the results and discussion of this paper. Steven recommended I look into characterizing the list of detected proteins (2,808) in relation to the whole C. gigas proteome. Detailed in post:
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Oysterseed DIA - New Analyses and wrapping up paper
I’ve been working on finishing up the Oysterseed DIA paper, and met with Steven today to discuss it. Details in post below:
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Crab Project - What I did for PCSGA 2019
In this post I will detail what I did for PCSGA 2019. I did some new analyses
and found some new results from our first assembled transcriptome.
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Oysterseed project progress; Data uploaded to PRIDE
Today I officially got an email that the RAW oysterseed data and *.elib search files have successfully been uploaded and published on PRIDE. I have some plans for finishing up this oysterseed project by October 20th, details in post.
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