Trinity failed; Re-run, and Notes from Crab Meeting

Trinity

My Trinity job failed and it turns out it’s because I was missing a \ after /gscratch/srlab/programs/Trinity-v2.8.3/Trinity. I fixed that and then re-sent the job to Mox. The new script is called 20181101_Cbairdi_trinity.sh and it lives in my /gscratch/srlab/graceac9/jobs/ directory on Mox.

Here’s the FastQC results that Sam did on the RNAseq data when it came in. Looks good!

Crab Meeting #6

Written on November 1, 2018