Lab Notebook

Crab transcriptome GOslim Got the BLAST output from the crab transcriptome to GO slim terms using 042320-bairdi_transcriptome-BLAST-to-GOslim.ipynb [Read More]

Today I tried some more GO-MWU stuff, but it didn’t really do much. After input at lab meeting, I tried using DAVID first, then GO-MWU… got 1 enriched biological process. Meeting with Steven –> new plan of things to focus on for now (writing, results we have). Details in post.... [Read More]

In this post I’ll detail what I’ve been trying in GO-MWU with the 2019 crab dataset, comparing infected and uninfected crabs. The post will detail progress from most recent attempt to frist attempts. [Read More]

Haven’t posted in a long long time… so in today’s post I’ll detail what I’ve been up to with the crab project: paper progress and trying out edgeR for differential gene expression analyses. [Read More]

Crab Work on new results to share at NSA (my talk is March 30th 3:45pm EST) Start manuscript for real! Friday morning lab writing blocks for Pubathon “The Panic Edition” will help! Analyses After all my TA duties are done (will be done by March 20th!!) start helping with qPCR,... [Read More]