Today I officially got an email that the RAW oysterseed data and *.elib search files have successfully been uploaded and published on PRIDE. I have some plans for finishing up this oysterseed project by October 20th, details in post.
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September Goals
September
Crab:
Keep tabs on data - when it arrives, begin trimming, assembling, annotating process
Prepare for PCSGA: take some of what I presented for EIMD 2019, and add more about the research project
Interview Genevieve and Shanelle for DecaPod episodes
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DIA Oysterseed Project - Finishing up Paper and cleaning up repo - in progress
I’ve been working on finally wrapping up the 2015 Oysterseed DIA project. I feel like I’ve tied off the paper fairly well this past week, and have been working on cleaning up and organizing the repository today. Details in post.
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Organizing Crab Qubit results and RNA isolation data - in progress
The past three or so days I’ve been meticulously searching through all of my notebook posts and RNA isolation result files to create a master table of all of the hemolymph tubes that have been processed both by myself and Sam. Additionally, I made a note as to whether all...
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August 2019 Goals
Crab Project Research create better system for keeping track of samples prepare for when seq data arrives: revisit reads trimming, transcriptome assembly, annotation, etc. start thinking about/preparing for qPCR portion of project Outreach update bittercrab.science with crab-related posts from my .io notebook interview Genevieve Johnson for 2 episodes: her thesis...
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